Serialized Form
Package ch.unizh.ini.friend.browser |
enter
JTextField enter
contents
JEditorPane contents
Package ch.unizh.ini.friend.graphics |
Package ch.unizh.ini.friend.gui |
tagName
String tagName
revision
String revision
tStampFileName
String tStampFileName
jPanel3
JPanel jPanel3
jPanel2
JPanel jPanel2
okButton
JButton okButton
jSeparator1
JSeparator jSeparator1
jPanel1
JPanel jPanel1
aboutLabel
JLabel aboutLabel
activity
float activity
activityFormat
NumberFormat activityFormat
negativeActivityBar
JProgressBar negativeActivityBar
positiveActivityBar
JProgressBar positiveActivityBar
jPanel1
JPanel jPanel1
activityTextField
JTextField activityTextField
exceptionTextAreaScrollPane
JScrollPane exceptionTextAreaScrollPane
exceptionTextAreaPanel
JPanel exceptionTextAreaPanel
jPanel1
JPanel jPanel1
jSeparator1
JSeparator jSeparator1
exceptionSummaryTextField
JLabel exceptionSummaryTextField
buttonPanel
JPanel buttonPanel
okButton
JButton okButton
exeptionSummaryPanel
JPanel exeptionSummaryPanel
exceptionTextArea
JTextArea exceptionTextArea
returnStatus
int returnStatus
simulationSetup
SimulationSetup simulationSetup
stimulus
Stimulus stimulus
tangentScreen
TangentScreen tangentScreen
- the plotting area
statusPanel
StatusPanel statusPanel
- the status panel.
activityMeter
ActivityMeter activityMeter
- the acitivyt meter
spikeReporter
SpikeReporter spikeReporter
help
FriendHelp help
fullScreenEnabled
boolean fullScreenEnabled
simulationEnabled
boolean simulationEnabled
cellButtonGroup
ButtonGroup cellButtonGroup
jSeparator2
JSeparator jSeparator2
jSeparator4
JSeparator jSeparator4
fadeSpikesCheckBoxMenuItem
JCheckBoxMenuItem fadeSpikesCheckBoxMenuItem
viewMenu
JMenu viewMenu
fileMenu
JMenu fileMenu
barRadioButtonMenuItem
JRadioButtonMenuItem barRadioButtonMenuItem
jSeparator5
JSeparator jSeparator5
quickStartMenuItem
JMenuItem quickStartMenuItem
brightenForegroundStimulus
JMenuItem brightenForegroundStimulus
colorSimulationButton
JRadioButtonMenuItem colorSimulationButton
exitMenuItem
JMenuItem exitMenuItem
toggleStimulusVisibility
JMenuItem toggleStimulusVisibility
jSeparator10
JSeparator jSeparator10
webPageMenuItem
JMenuItem webPageMenuItem
fullScreenCheckBoxMenuItem
JCheckBoxMenuItem fullScreenCheckBoxMenuItem
jSeparator7
JSeparator jSeparator7
menuBar
JMenuBar menuBar
simulationButtonGroup
ButtonGroup simulationButtonGroup
invertStimulusContrast
JMenuItem invertStimulusContrast
makeShorter
JMenuItem makeShorter
jSeparator9
JSeparator jSeparator9
hotkeytMenuItem
JMenuItem hotkeytMenuItem
fromMicrophoneMenuButtonItem
JRadioButtonMenuItem fromMicrophoneMenuButtonItem
recordMenu
JMenu recordMenu
hideCellNameMenuItem
JCheckBoxMenuItem hideCellNameMenuItem
makeWider
JMenuItem makeWider
jSeparator6
JSeparator jSeparator6
setPersistenceMenuItem
JMenuItem setPersistenceMenuItem
receptorViewMenuItem
JCheckBoxMenuItem receptorViewMenuItem
jPopupMenu1
JPopupMenu jPopupMenu1
jSeparator3
JSeparator jSeparator3
gratingRadioButtonMenuItem
JRadioButtonMenuItem gratingRadioButtonMenuItem
monochromeSimulationButton
JRadioButtonMenuItem monochromeSimulationButton
darkenBackgroundStimulus
JMenuItem darkenBackgroundStimulus
markScreenMenuItem
JMenuItem markScreenMenuItem
fromSimulationMenuButtonItem
JRadioButtonMenuItem fromSimulationMenuButtonItem
spotStimulusRadioButtonItem
JRadioButtonMenuItem spotStimulusRadioButtonItem
recordCheckBoxMenuItem
JCheckBoxMenuItem recordCheckBoxMenuItem
mutedViewMenuItem
JCheckBoxMenuItem mutedViewMenuItem
cellMenu
JMenu cellMenu
stimulusMenu
JMenu stimulusMenu
stimulusButtonGroup
ButtonGroup stimulusButtonGroup
makeTaller
JMenuItem makeTaller
edgeRadioButtonMenuItem
JRadioButtonMenuItem edgeRadioButtonMenuItem
recordButtonGroup
ButtonGroup recordButtonGroup
jSeparator8
JSeparator jSeparator8
simulationPropertiesMenuItem
JMenuItem simulationPropertiesMenuItem
brightenBackgroundStimulus
JMenuItem brightenBackgroundStimulus
simulationMenu
JMenu simulationMenu
darkenForegroundStimulus
JMenuItem darkenForegroundStimulus
makeNarrower
JMenuItem makeNarrower
jSeparator1
JSeparator jSeparator1
mysteryCellItem
JMenuItem mysteryCellItem
fillSpikesCheckBoxMenuItem
JCheckBoxMenuItem fillSpikesCheckBoxMenuItem
aboutMenuItem
JMenuItem aboutMenuItem
helpMenu
JMenu helpMenu
rotateStimulus
JMenuItem rotateStimulus
helpContents
JMenuItem helpContents
toggleSimulationRunning
JCheckBoxMenuItem toggleSimulationRunning
clearSpikesMenuItem
JMenuItem clearSpikesMenuItem
jSeparator1
JSeparator jSeparator1
- Deprecated.
helpLabel
JLabel helpLabel
- Deprecated.
okButton
JButton okButton
- Deprecated.
colorPanel
JPanel colorPanel
lValueLabel
JLabel lValueLabel
mValueLabel
JLabel mValueLabel
sValueLabel
JLabel sValueLabel
lProgressBar
JProgressBar lProgressBar
mProgressBar
JProgressBar mProgressBar
sProgressBar
JProgressBar sProgressBar
lmsFormat
NumberFormat lmsFormat
delay
int delay
nIterate
int nIterate
setup
SimulationSetup setup
task
SimulationTask task
jLabel1
JLabel jLabel1
jLabel2
JLabel jLabel2
simulationIterationNumberSlider
JSlider simulationIterationNumberSlider
jPanel2
JPanel jPanel2
okButton
JButton okButton
simulationDelaySlider
JSlider simulationDelaySlider
cancelButton
JButton cancelButton
jPanel1
JPanel jPanel1
cellName
String cellName
activity
float activity
stimulusName
String stimulusName
setup
SimulationSetup setup
stimulus
Stimulus stimulus
cellVisibleEnabled
boolean cellVisibleEnabled
plottingEnabledTextField
JTextField plottingEnabledTextField
cellComboBox
JComboBox cellComboBox
stimulus
Stimulus stimulus
- the stimulus
colorChooser
ColorChooser colorChooser
- Color-chooser to select the forground and background color of
the (color) stimulus.
simulationSetup
SimulationSetup simulationSetup
stimulus
Stimulus stimulus
showPhotoreceptorsEnabled
boolean showPhotoreceptorsEnabled
stimulusControlEnabled
boolean stimulusControlEnabled
mouseTransform
AffineTransform mouseTransform
mousePosition
Point mousePosition
spikeTriggeredStimuli
ch.unizh.ini.friend.gui.TangentScreen.SpikeTriggeredStimuli spikeTriggeredStimuli
markers
ch.unizh.ini.friend.gui.TangentScreen.Markers markers
- the markers that the user has placed
dirty
Rectangle2D dirty
spikeImage
Image spikeImage
spikeGraphics
Graphics2D spikeGraphics
viewport
JViewport viewport
foregroundMenuItem
JMenuItem foregroundMenuItem
brightenMenuItem
JMenuItem brightenMenuItem
backgroundMenuItem
JMenuItem backgroundMenuItem
darkenBackgroundMenuItem
JMenuItem darkenBackgroundMenuItem
stimulusControlPopupMenu
JPopupMenu stimulusControlPopupMenu
invertContrastMenuItem
JMenuItem invertContrastMenuItem
rotateMenuItem
JMenuItem rotateMenuItem
darkenMenuItem
JMenuItem darkenMenuItem
brightenBackgroundMenuItem
JMenuItem brightenBackgroundMenuItem
Package ch.unizh.ini.friend.record |
setup
SimulationSetup setup
startTime
long startTime
lastInput
Object lastInput
lastSpikingCellReturn
boolean lastSpikingCellReturn
listeners
LinkedList<E> listeners
reportingEnabled
boolean reportingEnabled
time
long time
reporter
SpikeReporter reporter
p
Point p
panel
JPanel panel
image
BufferedImage image
dim
Dimension dim
g
Graphics2D g
stimSize
int stimSize
stimAspectRatio
int stimAspectRatio
spikeSize
int spikeSize
font
Font font
spikePositionJitter
int spikePositionJitter
rand
Random rand
spikeLogger
SpikeLogger spikeLogger
startTime
long startTime
dimOp
RescaleOp dimOp
Package ch.unizh.ini.friend.simulation |
inputs
Collection<E> inputs
- The input components for this one.
spikeSound
SpikeSound spikeSound
muted
boolean muted
lastInput
Object lastInput
lastSpikingCellReturn
boolean lastSpikingCellReturn
deliverable
SimpleOutputMonitor.Deliverable deliverable
- The prototype of the deliverable.
updateInterval
long updateInterval
- The update interval in milliseconds.
nextUpdate
long nextUpdate
- The time of the next update.
Package ch.unizh.ini.friend.simulation.cells |
value
float value
- The current value.
newValue
float newValue
- The new output value.
offset
float offset
location
RetinotopicLocation location
coneType
int coneType
location
RetinotopicLocation location
tau
float tau
- the lowpass time constant of the HorizontalCell
lowPass
Filter lowPass
- A low-pass filter.
leakTime
float leakTime
- The leak time constant in seconds.
threshold
float threshold
- The threshold where the cell will fire.
potasiumReversal
float potasiumReversal
- Potasium reversal potential. The cell potential will not go below this value.
This is the lower power rail of the cell. It prevents the cell from becoming infinitely
hyperpolarized.
spikeRateMeasurementWindow
float spikeRateMeasurementWindow
- spike rate measurement time window in seconds. The spike rate is measured with a fading memory of this duration.
rateMeasurementFilter
LowPassFilter rateMeasurementFilter
spike
boolean spike
- Encodes whether the cell is making a spike now.
newSpike
boolean newSpike
- Encodes whether the cell will make a spike after the next
IntegrateFireCell.update()
.
integrationPotential
float integrationPotential
- The currently integrated membrane potential.
maxRate
float maxRate
- the maximum spike rate, measured in spikes/
IntegrateFireCell.SPIKE_RATE_TIME_SCALE
.
time
float time
lastSpikeTime
float lastSpikeTime
shape
ConvexPolygon shape
- The shape of this photoreceptor.
stimulus
Stimulus stimulus
- The stimulus for this photoreceptor (and likely the whole simulation).
gain
float gain
- The gain of the high-pass output.
highPass
Filter highPass
- A high-pass filter that is used to compute the transient gain.
location
RetinotopicLocation location
r
Random r
- The pseudo-random generator.
Package ch.unizh.ini.friend.simulation.synapses |
weight
float weight
- The weight with which the input will be multiplied.
Package ch.unizh.ini.friend.tests |
shapes
ArrayList<E> shapes
- List of shapes to draw.
intersections
ArrayList<E> intersections
- List of intersections to fill.
width
float width
- Width of the visible area.
height
float height
- Height of the visible area.
vt
float vt
- Virtual time.
vdt
float vdt
- Virtual dt per iteration.
pre
String pre
- The string to prepend to the ouput.
post
String post
- The string to append to the ouput.
stream
PrintStream stream
- The stream to print to.
stimulus
Stimulus stimulus
shapes
ArrayList<E> shapes
- Shapes of the photo receptors.
intersections
ArrayList<E> intersections
- Intersections between the shapes of the photoreceptors and the stimulus.
receptors
ArrayList<E> receptors
- The photoreceptors.
setup
SimulationSetup setup
- The simulation setup.
jSlider1
JSlider jSlider1
Package ch.unizh.ini.friend.topology |