Spike Toolbox

Function Index
Alphabetical

A
STAddrDescribe - Print information about an address
STAddrLogicalConstruct - Build a logical address from a neuron and synapse ID
STAddrLogicalExtract - Extract the neuron and synapse IDs from a logical address
STAddrPhysicalConstruct - Determine a synapse physical address
STAddrPhysicalExtract - Extract the neuron and synapse IDs from a physical address
STAddrSpecChannel - Address specification utility function
STAddrSpecCompare - Compare two or more addressing specifications
STAddrSpecDescribe - Pretty print an addressing specification
STAddrSpecFill - Fill empty fields in a address specification
STAddrSpecIgnoreNeuronSynapse - Address specification utility function
STAddrSpecIgnoreSynapseNeuron - Address specification utility function
STAddrSpecSynapse2DNeuron - Address specification utility function

C
STConcat - Concatenate two spike trains
STCreate - Create a spike train
STCreateConstant - Create a constant frequency spike train definition
STCreateFromVector - Package a vector of spike data as a spike train instance
STCreateGamma - Define a spike train using a gamma function for the ISI distribution
STCreateLinear - Create a linearly changing frequency spike train definition
STCreateSinusoid - Create a sinusoidally changing frequency spike train definition
STCrop - Crop a spike train to a specified time extent
STCrossCorrelation - Calcualte cross-correlation for instantiated spike trains

D
STDescribe - Print a description of a spike train toolbox variable

E
STExtract - Extract a single spike train from a multiplexed mapping

F
STFindSynchronousPairs - Identify synchronous spikes in spike trains
STFlatten - Convert a mapped spike train back to an instance

G
STGetSpikeTimes - Extract spike times from a spike train

H
STHasDefinition - test whether a spike train has a definition
STHasInstance - test whether a spike train has a instance
STHasMapping - test whether a spike train has a mapping

I
STImportServer - Import a spike train from a text file
STInstantiate - Convert spike train definitions into concrete trains
STISIHist - Construct an ISI histogram for a spike train
STIsValidAddress - Checks for a valid address for a given addressing specification
STIsValidAddrSpec - Test for a valid address specification structure
STIsValidChannelAddrSpec - Checks an address specification for use with channel IDs
STIsValidMonitorChannelsSpecification - Tests the validity of a monitor channels specification
STIsValidOptionsStruct - Tests for a valid Spike Toolbox options structure
STIsValidSpikeTrain - Test for a valid spike train
STIsValidSpikeTrainLevel - Test for a valid spike train level description
STIsZeroDuration - Tests for a zero duration spike train

M
STMap - Map a spike train to a specific neuron and synapse
STMultiplex - Multiplex spike trains

N
STNormalise - Shift a spike train to time zero and fix its duration
STNullTrain - Create a zero-duration spike train instance

O
STOptions - Retrieve and set options for the Spike Toolbox
STOptionsDescribe - Display info about an options structure
STOptionsLoad - Load Spike Toolbox options from disk
STOptionsSave - Save Spike Toolbox options to a file

P
STPciaerExport - Export a mapped spike train to a file or to text
STPciaerImport - Import a spike train observed from the PCI-AER monitor
STPlot2D - Make a 2D plot of the mean frequency over a time interval of each pixel in a 2D array.
STPlot2DISI - Make a raster plot of the spike train, differentiating between rows
STPlot2DMeanFreq - Make a 2D plot of the mean frequency over a time interval of each pixel in a 2D array.
STPlot2DRaster - Make a raster plot of the spike train, differentiating between rows
STPlotDef - Make a plot of a spike train definition
STPlotInstFreq - Make a plot of a spike train instantaneous frequency
STPlotRaster - Make a raster plot of the spike train
STProfileCount - Bin spikes by a time window, and return the counts
STProfileCountAddresses - Bin mapped spikes by a time window, and return the counts for each address
STProfileFrequency - Calculate a frequency profile from a spike train
STProfileFrequencyAddresses - Calculate a frequency profile from a mapped spike train, for each address
STPSTimeHist - Construct an ISI histogram for a spike train

S
STShift - Offset a spike train in time
STSieve - Filter a spike train by Inter-spike interval
STStimServer - Send a mapped spike train to the PCI-AER board
STStimulate - Send a mapped spike train to the PCI-AER board
STStrip - Strip specified spike train levels from spike trains
STStripTo - Strip undesired spike train levels from spike trains

T
STToolboxDefaults - Creates the user-configurable default options for the spike toolbox
STTrainDescribe - Print a description of a spike train

W
STWelcome - Initialise toolbox and display welcome page

Categorical function index

Spike Toolbox